rs37034859 SNP Detail

Summary

• ID
  rs37034859
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:32456899 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGCCCATTG CTCTGCCTCC
  TGCCAATAAT ATAAGCCCAA CAAAGAGGAC AATCTCCCTT GTCCTTTACA GAAAAGAATG
  GAAACTTGTC ACAACTGCAA ACTTTCAAGT TCTTCCACTG AGATAAGCTT CCCTTTCTGG
  CTTGCCCTGC TGGTGACTTG CTGACCAGTT CCCCCAAGGT TTCTTAGTAT GTGTCACAGT
  K
  AGGCTTTCGG TTTGCAGATC CTGGAGTAAA ACATTTACGA GGGTTCCAAC CACTGGGTCA
  TGGTGCCAGG ACAGTTCTTC AGCTGGAGTA AGGTTTCTTG GCTCCAACCT CTGCAACCAC
  AAACCTTTCT GATGGAGGGA GGATGGCATG AAAGTCACTC AAGAGAATGG ACTTGACACT
  TGCAAAAAAG GACAAAATAA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51580497	NES14853904	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	T	G	G	G	G	G	T	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37034859					SNP	G	G	G	G	G	G	T	G	G	G	G	G	T	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51580497	NES14853904	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:32456899 () rs orientation: forward

Symbol	Name	Function Class
Plxna4	plexin A4	Intron
Rr628114	regulatory region 628114	within coordinates
Rr628115	regulatory region 628115	447 bp distal
Rr628116	regulatory region 628116	827 bp proximal