rs37027083 SNP Detail

Summary

• ID
  rs37027083
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130589549 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GTTCAGAATG CTATTCTTCA GCAAATCGTG GATCCTTACA
  CTAAAACTGC TTTGTAGGTC TGAGGTGGTA GATTTTTGGC AGTATAGTCC CAGAATATTC
  M
  ATACTACAGG CTGGCCTATG ACAACTTTCA CAAGCACCTC TTCTTTAAAA AAATGAAACG
  AAAACTGTCC GTCCACATTG GAATAATGAC CATTCAACC                       
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51638255	NES14658270	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	A	C	A	C	A	C	C	C	C
ss135899913	ENSMUSSNP3459357	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs37027083					SNP	C	C	C	C	C	C	A	C	A	C	A	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51638255	NES14658270	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130589549 () rs orientation: forward

Symbol	Name	Function Class
Gm36443	predicted gene, 36443	within coordinates
Rr585209	regulatory region 585209	1877 bp distal
Rr585210	regulatory region 585210	1550 bp distal
Rr585211	regulatory region 585211	613 bp proximal