rs37023374 SNP Detail

Summary

• ID
  rs37023374
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:135871027 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAACCTCATT GATGAGTTCA
  CTCCTGGGAC TGCCTTTTCT GTTCATGCCT ACAGATAATG AGGGGGAATA CTGCACACAT
  GTCCGATGAG ATATTAATCT TTGAAGGTGT ATAGTTCCAC CTAAATATTG TTAACTTGCT
  TTGGCATAGT GGGCATTTTC TTGCTATGGT TGAACATTTT CAAATTTTAG TAGTGTTCTA
  Y
  ATATCGACTG TTCTTGCCTG TATCATCAGA AATCTACTCT CTAGGAAGCA TCTTAAGAGG
  CTTCAGTGCT GAGAGGAAAC ATCTCAAGCT GGACACAGGG TTTCACTGCT ATACTGTGCC
  TTTGACTTTG GTTCCGTAAT TATGACTTCC TGGCAGAAAG TTGATTTCAC AAGACAATCT
  GTGAGTTTTA TACATCAAAG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51642410	NES14646557	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37023374					SNP	C	C	C	C	C	C	T	C	C	C	T	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51642410	NES14646557	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:135871027 () rs orientation: forward

Symbol	Name	Function Class
Bank1	B cell scaffold protein with ankyrin repeats 1	Intron
Rr585808	regulatory region 585808	68 bp proximal
Tssr35842	transcription start site region 35842	1898 bp downstream