rs37020384 SNP Detail

Summary

• ID
  rs37020384
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:31067782 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCAAACAAAA TAAAACCCTG
  ACACAAAAGT GCTCCGTCTG CGTAACATTT ACTCAAAGTT CTCCTTCAAA CAACGGAAAC
  AAGTGAACCC GTTGTGTTTG TGCCTTTACG GGACAGGAGA CACAGTGGTA GGACATTTGG
  GTAGGACACA AGCTCTGGGG TCCAGCTCCT TTTGTGAATC TGCTCTCAGG CAGGCCACCC
  R
  ACCTAATTAG GCCAGTTTAA TCATCTGGTG ACACACAGGC CTGCCTCGTG CTCTACTCAA
  GCAATTTTCT GGGCAACCTT ATAGGCTAAG GGCCACTATT ACCCCATCCT AGAGATAAGG
  AAACAGAGGG AGCTTGGGGA CGTACCTAAG GTTGGCCAAT CAGTGGGCGG TGGACAAGGC
  ACTCAAAAGC CATGGGAGGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51260333	NES13792649	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37020384					SNP	G	G	G	G	G	G	A	G	G	G	A	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51260333	NES13792649	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:31067782 () rs orientation: forward

Symbol	Name	Function Class
Rr627878	regulatory region 627878	1886 bp distal
Rr627879	regulatory region 627879	31 bp proximal
Rr627880	regulatory region 627880	1574 bp proximal