rs37018627 SNP Detail

Summary

• ID
  rs37018627
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr5:49421940 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TTCCGTCATT CTTATCCAGG
  GGTCAGTGAG GATGTCACAG TCACAAATTG ATCATGTGAT GCAGAACTGC AGTCATCAGA
  AGGCTTGACA AAGCAGCTTC TCAGGTAGCT CACGTGCAGA ACTATATTTG GAAAGCTTAC
  TTTCAATCTA AGTGGCTTCT CCAGGTAGTG ATCTAGTGAC AAAATCACCA GCTTTTTTCA
  R
  AGTCACTGAC TCAATAGGGA AAAGGAGATT AGGATGAATG CTGCAATGTC TGTCACAACA
  CAACTTTAGG AGAGACACTG CATCAGGTCG GCCACAGTCT GGTAGTCATA CAGAGGCAAT
  GCAAGGGAGA GCAGTGTACT GAATATAACC ATGAATACCA CGAGCCAAGT GATATCACAG
  CAACAAGCAT TTACACAGCA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss51105436	NES13868557	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	A	A	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs37018627					SNP	G	G	G	G	G	G	G	G	G	A	A	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51105436	NES13868557	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr5:49421940 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Gm73321	predicted gene, 73321			within coordinates
Kcnip4	Kv channel interacting protein 4			Intron
				mRNA-UTR