rs37017823 SNP Detail

Summary

• ID
  rs37017823
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:21999014 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTTACAAGCC AGGGTGGAAA
  TTTGTCTGTC ACATCTAGCA TTCCCACCAT CTGGGATTTC TAAAGTGTGT TTCCCAACTA
  CATCTTTTTC AGTTTGATAG GATGTAAATT TCTCCTTTTT TTTTTCTTCA TCCACTAAGA
  CCATTTTAAA ACTCAATTCA AAGATTAAAA AGTCATATTA AGAAACTGAC TTAAAACTAT
  W
  CAAACCCTTC CATATCAAAA TGAGCATTGT ATATAAAAAC AACAACAACA AAACAAAACA
  AAAACCAAAC CTACCCCAGG CAACAATATA CTCAGGCATC ACTCAAAACT CTATTGTGTC
  TCCTCTCCTT AAATTGCCTT CAGGGAGGGC CTGTATTTCT TGCTTTTCTG AAGGAGTTTT
  AATGTTGGCA AAAATCTCAT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
ss51434342	NES14436889	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	T	A	A	A	T	A	T
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ
rs37017823					SNP	A	A	A	T	A	A	A	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51434342	NES14436889	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:21999014 () rs orientation: forward

Symbol	Name	Function Class
D3Mit176	DNA segment, Chr 3, Massachusetts Institute of Technology 176	433 bp distal
Gm31813	predicted gene, 31813	within coordinates
Rr574170	regulatory region 574170	1548 bp distal