rs37008242 SNP Detail

Summary

• ID
  rs37008242
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:65947354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTTTCGGAGC CCAAGCAATG
  ATCTCTCTCT CAAAACCCTT ACTCATAAAT AGCCATTTTA GTCTTTAGTA TGTTATGATG
  GTTAAGAATC TATTTGTAAC TCATGGCTAG GAGTGTGCTT CTTTGTCCTT GCTACATCAG
  AAGCATATTA GACACAGAGA AGCCCTGGGT CAAGGATGTC TGAGAGGAGG CTTTTTCAAT
  M
  CCTCAAAAAT TATCTGGTTT ACAAGGATAA GTTGGAGCCG AGACTAAGGG AACAGCCAAA
  TAATGATGGC CCCAACTTGA GATCCATTCC ATGTGAGAGA GCCAACTCCT GACACTATTA
  ATGATCCTCT GCTATGCTTG CAGACAGGAA CCTAGCACAA CTGTCTCCTG AGAGGCTTCA
  TCCAGCAGTG GATGGAGGCA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51539462	NES14688482	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	A	C	A	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs37008242					SNP	C	C	C	C	C	C	C	C	C	C	A	C	A	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51539462	NES14688482	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:65947354 () rs orientation: forward

Symbol	Name	Function Class
Rr577786	regulatory region 577786	877 bp proximal