rs37005140 SNP Detail

Summary

• ID
  rs37005140
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:16999890 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATTCCAGGAT GAAAAGCCGA
  ATGAAGTGCG ACATGAAAGA GACAAGCATA CAGCCCGGGC TTCCCAGCTG GAAGCAGATG
  GAGAAAACAT GTTTCGTGAA CTGAAATTCC TGAAGTCTAA ATCAAGAAAC TGAATGGATG
  CCTTGCCAAG TTCAATTCTG TACATCACCA CTTGCTGTGT ACAAGATTGA TGCTTCTATT
  R
  GGGAGCTGCG GGGTCCTGGC GCGCAGAGCG GGAACGGGAG GAGTGAGAGA AGGGCAAGAC
  CACCGTCCCG TTCTGCCGGC TTATTGCTGT CGTTAGTTCC GCAAACAGAG CACAATAGCC
  CAAATCATAT TAAGCACAGG GCAGAGCCAG AAGGGAAGAA GTGCCAGAGG AGACAGGAAG
  TGAAGGGCCT TCAGGTGCAC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
ss51242915	NES13805256	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ
rs37005140					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51242915	NES13805256	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:16999890 () rs orientation: forward

Symbol	Name	Function Class
Gm67154	predicted gene, 67154	within coordinates
Rr626743	regulatory region 626743	within coordinates
Rr626744	regulatory region 626744	340 bp distal