rs36958261 SNP Detail

Summary

• ID
  rs36958261
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:117436035 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGAGAAAGAA AAAAGAGGGA
  AAGAAAAATG AGCTGCCATC AAGACATTCA ACCTTAAAGA AGTGTAAGAT AGCTCTCCAC
  CCTCCCAAGC TATGACACTT CTCTTCTTCC ACTTTAGCCT TTGACCTTTG GTGAGGTCAT
  TGCCTGTTGT GCTTATGGTC AGGGTTCCTT TGAGGACAAG CTGCCTGAGG AGTTACCTTC
  M
  GACCTTTTGT TATTATACAA AATCAGACCT AAATTGAAAC TCTGGGCAAC TTTTTCTCCT
  TAGTCAAAAA GAACTAGGGC CTAGATCTCG GACTCAGAAC TGAATGTCCC AGGCACACTG
  GAGACTTCCG TGGTCTGAAT ATGAAATGTT TCCACACCTA AACTCACGTA TCGAATGCTT
  GGTTTCCATC TGGAGACACT                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
ss51408781	NES13707167	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	C	A	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NZW/LacJ
rs36958261					SNP	A	A	A	A	C	A	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51408781	NES13707167	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:117436035 () rs orientation: forward

Symbol	Name	Function Class
Rr637324	regulatory region 637324	1165 bp proximal