rs36956266 SNP Detail

Summary

• ID
  rs36956266
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:119741507 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTGCTTTGTA CTCGGCATTT
  CTGCTCTCAG AGCAAGCTGA AGGGTCAGGT TAAGTGTGTA TTAGCTTCAG TGAAACCCAA
  AGTCTCCCAT CATGGACTGT ACAGGGATTT TAGTAGGTAC GATAGTCTAG CCATTCGGGA
  CAGGAGTAAA GATATTCAGA ATAGGAGCAG CAAAGGACAG ATAAATGTTG TTCTTGGAAA
  S
  TACCAGGGCC ATCGTCGATA CCAAAGGCAC AATGATTATG GTTTAAAAAT GTTAAGAGTT
  TGTGTCTGAC TCAGATGCTA ATATAATGCA GCTTGAACTC CAAAAGAGGA TTTGTTCCTT
  TGTTCCCTTT TGATTATTGG AACCCCTCGA AATGGCAGGC ACTGCCTCAC CCATTGATAA
  TGTGGAGTAA GGCAAGATCT                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51014262	NES13912268	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36956266					SNP	G	G	G	G	G	G	G	G	G	G	C	G	G	C	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51014262	NES13912268	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:119741507 () rs orientation: forward

Symbol	Name	Function Class
Gm65304	predicted gene, 65304	289 bp downstream
Rr583954	regulatory region 583954	291 bp distal
Rr583955	regulatory region 583955	839 bp proximal
Rr583956	regulatory region 583956	1424 bp proximal