rs3695531 SNP Detail

Summary

• ID
  rs3695531
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87656627 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        ACCCA GCACTCAAGA GGCAGAGGCA
  R
  GCAGAGCTCT TGAGTTCCAG GCCAG                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss5071686	WI_WGS_3_88537426	WI	MOUSE	f	SNP	G		A
ss135467993	ENSMUSSNP763104	ENSEMBL	ENSEMBL_Sanger	f	SNP		G		G
ss320835329	CHEV_3_87553242	CHEVERUD	SCREENING_POP	f	SNP					G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3695531					SNP	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87656627 () rs orientation: forward

Symbol	Name	Function Class
Lrrc71	leucine rich repeat containing 71	695 bp upstream
Pear1	platelet endothelial aggregation receptor 1	mRNA-UTR
Rr579535	regulatory region 579535	488 bp distal
Rr579536	regulatory region 579536	within coordinates
Rr579537	regulatory region 579537	97 bp distal
Tssr33946	transcription start site region 33946	765 bp upstream
Tssr33947	transcription start site region 33947	752 bp upstream
Tssr33948	transcription start site region 33948	722 bp upstream
Tssr33949	transcription start site region 33949	705 bp upstream
Tssr33950	transcription start site region 33950	690 bp upstream