rs3694813 SNP Detail

Summary

• ID
  rs3694813
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151770880 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCGCTCTTAC AGAGGACTTA
  AGTTCAATGT CCCTCATGTA CATTGGTGGC TCACAGCCAT TCATACCCAG TTCCAGGGAA
  CCCGACAGAC ACACACACAC ATGGTGCACA TACATACATG CAGGCAAAAA TAAATCCTTA
  ATTTAGAATA AAATAGATCT AAAACCTTTT TAATTGGCTA AATGAACCAA AACCCATAAA
  Y
  TCTTCACCAA GAAAACTATC AAATACTGTC CCTAGCCAAA CACATCTTCT CCACTACCTT
  AGGGCTGGTG CTCAGCAAAG CTTTCCTTTC TAGAAGCCTT ACCTGGGCTT CTTCTCAGCC
  AATCTCCACT GCACTTCACT TTTCCTACCT AAATAACTCA CATTATTAAA CTAGTCCTTA
  AGCATCTGGT GATGACAACT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
ss5070963	WI_WGS_3_152653295	WI	MOUSE	f	SNP				C	T
ss45487463	mCV24212029	ABI	CRAMUS_MOUSE	f	SNP	C	C	C		T	T
ss136100460	ENSMUSSNP266619	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C			T
ss321027899	CHEV_3_151728207	CHEVERUD	SCREENING_POP	f	SNP							C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C3H/HeJ	C57BL/6J	DBA/2J	LG/J	SM/J
rs3694813					SNP	C	C	C	C	T	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151770880 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	within coordinates
Rr587440	regulatory region 587440	1495 bp proximal
Rr587441	regulatory region 587441	1602 bp proximal