rs36948128 SNP Detail

Summary

• ID
  rs36948128
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:36214841 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTGTCTTT TGCTCTTCTT
  TCTTATGCAT TTTGGGATTT CTTTTTGTTG AGAATTTTAT GACTCTGTTT TGCTTCACTA
  TTTATTATAT AAACATCTTT GTTTTACTGT ATTGATTGGT TGCTTTGGGG CTCACATGTG
  ACAAATATTT TCTATAACAA AGACAGTGGC TTTCATCTCT GTGGATCTCT TCTTTTTCTT
  Y
  CTATTACTCA GCATTGCCTT TTGCGGAGCA AGCACAAATC CAGACATTGT GTAAACCAAT
  CGGTTTGATC AAATCTTGGC AGTAGGTCAG ATTTTGATGA GGGTTGTAGT TTGCCAAAAC
  CTTCTCCAGA GGGTAAATTG TATTTCTTTA CATTTTGTGA TTTACACATA ATACACCATT
  CCTCATCAAG ATCACAGAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51281857	NES13778696	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36948128					SNP	C	C	C	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51281857	NES13778696	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:36214841 () rs orientation: forward

Symbol	Name	Function Class
Gm57759	predicted gene, 57759	667 bp upstream
Gm67063	predicted gene, 67063	within coordinates
Rr628531	regulatory region 628531	930 bp proximal