rs36939138 SNP Detail

Summary

• ID
  rs36939138
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:84341133 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAAGCATGCC CCTTGCTGAG
  GACTGCATGA AGGGATGCCT CAGTGGGCTC TGCTCTACCA AATGTAAAAT ATACCTGGAA
  ACTATTATTT CCTTGGTCCC TTTCCCCACC TCCCCTTTTC AAGCCCTGCA GCTCTGAGAT
  ACGGCACTGA TAGAGAAGGC CTACTCCAAA TGAGTTAGAT GCAGACCATC TGGCTTCAGA
  R
  CTCATGGAGA CCTTTTCTTT TGCACTTAGA GGCAGTGTTC TGGCTGCTGT TTGACCTCTA
  TCCACTTTCT ATGACTCAAG TAGATAAGGA GCTTGGGGTT TCACCAAGTA CCCCTCTCCT
  CCTGGTGGTT TAGTTCTTGT CCTTAGTGAG ACCTACAGCA AAGAGATAGG TCTTTCCAGA
  TGTAGAGTAC ACTTCTGGAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51734143	NES14803912	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	A	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	BALB/cByJ	CAST/EiJ	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36939138					SNP	G	G	G	G	G	A	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51734143	NES14803912	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84341133 () rs orientation: forward

Symbol	Name	Function Class
Rr633039	regulatory region 633039	941 bp proximal