rs3693320 SNP Detail

Summary

• ID
  rs3693320
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:148859006 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GAAAG CCTCTCTGAG TACACCAGGG
  Y
  CCACCTAGGC CCATAGAAGT CTCTG                                      
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
ss5069455	WI_WGS_4_144150559	WI	MOUSE	f	SNP	C			T
ss148018793	ENSMUSSNP1624426	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C
ss321422838	CHEV_4_148148658	CHEVERUD	SCREENING_POP	f	SNP					C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	LG/J	SM/J
rs3693320					SNP	C	C	C	T	C	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:148859006 () rs orientation: forward

Symbol	Name	Function Class
Rr604757	regulatory region 604757	955 bp proximal