rs3693060 SNP Detail

Summary

• ID
  rs3693060
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  142
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr11:73131427 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CCTGA TCCTGGGGGC CAAACTCCAC
  S
  CCACACTGAA GCTAGAAGAA CTCAC                                      
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129S4/SvJae	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	CBA/J	DBA/2J	LG/J	SM/J
ss5069192	WI_WGS_11_73841999	WI	MOUSE	f	SNP	G				C
		KMRGMT	KMRGMT-Mouse				G		C	C	C	G	C
ss38827569	mCV25414402	ABI	CRAMUS_MOUSE	f	SNP			G	C	C			C
ss132423070	ENSMUSSNP4888096	ENSEMBL	ENSEMBL_Sanger	f	SNP			G	C				C
ss323746068	CHEV_11_73054103	CHEVERUD	SCREENING_POP	f	SNP									G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129S4/SvJae	129X1/SvJ	A/J	C57BL/6J	CAST/EiJ	CBA/J	DBA/2J	LG/J	SM/J
rs3693060					SNP	G	G	G	C	C	C	G	C	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr11:73131427 () rs orientation: forward

Symbol	Name	Function Class
Trpv1	transient receptor potential cation channel, subfamily V, member 1	Coding-NonSynonymous