rs36923486 SNP Detail

Summary

• ID
  rs36923486
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147160423 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGACTTAGGC TGATGTCAGC
  AGAACCCCTT CAGCTCCCAG AGAGTGGCTA GTTGTTGGCT GATCTCCTAG ATTAGTCTTA
  ATGTCTTAAT GGAACAATTG AATTCTCATT CATGTATCTC TAACCCACTC ACATAAAAAG
  CCAGAAATGT CCTTCCTAGA GGCCAGTTAG CCTAAATAGA CATGGCAACC TGTAAGGGCT
  Y
  GGGTCTAATT CTGCTTTTGT TCCCTAGCTC TGTCCACTGA CTAGGCAAGA CATGTGACAG
  AACTCATAAG GAAGGGACAA AGGACACACT GCTTGGTGTG AACAGTTGGT TCACATAAAA
  GGCACAGATG TCATGACAGG TGAGGACTGA AGGCTATTCA CAGAATTAGT GCACCACAGA
  GAAGTGGAAG GGAATGGATG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	BALB/cByJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51047004	NES13892167	PERLEGEN	MM_PANEL2	f	SNP	T	T	C	T	C	C	T
SNP Consensus Information
SNP					Consensus Type	A/J	BALB/cByJ	CAST/EiJ	FVB/NJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36923486					SNP	T	T	C	T	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047004	NES13892167	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147160423 () rs orientation: forward

Symbol	Name	Function Class
Rr587152	regulatory region 587152	543 bp proximal