rs36922928 SNP Detail

Summary

• ID
  rs36922928
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:131308008 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGTACTTGC AGTGCCTCCA
  TTTCGATTGT CTTCTGGATG GTAAGATAGT CCACGTCAAA AATTGAGTTG TGTGTGGAGG
  AGGCATGGCA TGGTTTAAAG TATTTGTCAC GTCTCGTAAA GGTAGTCATG GCGCCTCTCT
  CAGTAGAGCT GTCATGAAGA CTAAGCTGTT TTCGTTCTGA ACACTTTGAG TGAACCGTGG
  R
  ATCTCGTTTC CACTTTCCCT CCCCGTGAGT GTTATTCATT GTGGGGGCAG AAGGACAGAA
  AGTGAATCCT GAAAGCACAT TGTTTCCCTG TGCCACGCTA GCCTGCCCAC CGTGGTGAGC
  TGCCTCCCTC AGGGCACACG TCTGGAACCA TTGCTCTCCG AAGCCTGTGG AGTCAGGGGC
  TGTTTTGTTT CTGTGTTTGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51640955	NES14656489	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36922928					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51640955	NES14656489	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:131308008 () rs orientation: forward

Symbol	Name	Function Class
Papss1	3'-phosphoadenosine 5'-phosphosulfate synthase 1	Intron
Rr585372	regulatory region 585372	713 bp proximal