rs3690831 SNP Detail

Summary

• ID
  rs3690831
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  107
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr4:80684643 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        GCCCAGTATG TGTAGTAGAT CAAAGTCAGG GCTTGTCACA
  TACTAGGCAA GTACTCTAGC AACAGTACAC ATCCAGCGTT GCTttttgtt tgctttgttt
  R
  ttgttttgtt taggatggtt ggttggttgt gttttttttt ctcattgtgt tgttttgttG
  AAGCAGTCTT GGATGGCGCC AGCTGGCCTA CAATTCTGTG                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	C57BL/6J
ss5066946	WI_WGS_4_78061021	WI	MOUSE	f	SNP	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	C57BL/6J
rs3690831					SNP	A	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:80684643 () rs orientation: forward

Symbol	Name	Function Class
Rr594173	regulatory region 594173	298 bp distal
Rr594174	regulatory region 594174	461 bp distal