rs36902369 SNP Detail

Summary

• ID
  rs36902369
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:22372436 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGTATGCTT TGCTTTTCAT
  GATTCCATCA TCAAACCCCA GCATGCTGTT TGAATTAGCT CTCCTTGACC TTTTAGGACT
  TGAGTAGGAA GTTGGGATTT TTTCCTCCCT CTGTATACTT CCCTTGTTCC TTCTTTTTCC
  TCCTCTCCCT TTCCACCCCC ATTAATTGAT ATGACATATT CTAACTTTCA ATTTCAGGGC
  W
  TTTTGTTGAC AGTGAAAATA TCTTTGCTTC ATCTGGCATT TACTAACTAT ATTGAAGAGT
  ATTCAAAATA TTTTTTTTGT GTGTCTCAAA TCACACTGTA AAATTTGTAA AATCAGTTTT
  AAAAATTTAC ACAGTTAAAG TCCTTATAAT ATGTATAATT GTATATACTA TATATACAAT
  TACTTTTGTA TGCCCACAGG                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51432576	NES14447212	PERLEGEN	MM_PANEL2	f	SNP	A	T	T	A
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36902369					SNP	A	T	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51432576	NES14447212	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:22372436 () rs orientation: forward

Symbol	Name	Function Class
Gm65162	predicted gene, 65162	within coordinates
Rr574229	regulatory region 574229	1200 bp distal