rs36897359 SNP Detail

Summary

• ID
  rs36897359
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:23937401 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATACATCCTG ACATACTTCT
  TTTCTGTATA TCCCCTCCTA CCTGTGACTA AGCACATTCT GTGTAGTTGG GACAACCAAC
  CTTGTTTATA AAAGTGAAAA CTCAAGAGAT GGCTTGTCTC CCATAAACAT TCCAGGATTT
  CAGGAAGTTA TCCTTGGACA AGTCAAACTT AGAGATTAGA GGCATTTTAG CTCTCACAGA
  M
  GTCTGCATTA TACTGGGATG CTGCAGTAAG AAAGGCATGG CTACTATTGT TTGGGAATAG
  AAATTGGGTC ACTAGAACTG TTTTTGTATT TACATTCCAG AGCTCGATGA CAATCATTAC
  TACTAACTAG TTCATTTACT TCTCTTCAGA TACTTCAACC ACTAACAGAT CATTTAGCAT
  AAGGCTAACA TAGCTCTATA                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51561516	NES14862937	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36897359					SNP	A	A	A	A	A	A	C	A	A	A	C	A	A	C	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51561516	NES14862937	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:23937401 () rs orientation: forward

Symbol	Name	Function Class
Rr627195	regulatory region 627195	1253 bp proximal