rs36888102 SNP Detail

Summary

• ID
  rs36888102
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147159043 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GTAATGGGAA GGAGGAAAGG
  GGCTTTGGGT TGGTTGGAAA CCTTGAGTTC CCTCTGGAGT TGATCACCTC AGCCATTTAT
  CACTCCCCAT TTTGAGAGAG AAAAATAAAG TGTCAAACAT TTATGCTAAC TTCCACTAGA
  AGCTCAACCG TTTGCACCAC CAGCCTCCTA GGTTGTGTGC CAGCTGACAA GGCTGACCAC
  M
  GAGAGCCCAG AATAAATAAG GAGCTGGTCT CTACTTCCCC GCACTGTTCT CAGAATGCAC
  CAGACTTGTG TGGCTGGCTT TTTGACATTT CTTTAGAGCA ACTTTGGATA TTTAACCCCT
  CATCCACATT CTTGTACCTC ATACATTTAA TTATAGCAGG ATGCATTGTG GTCCCAAAGG
  ACTTCCTTCA CATAGCCTGG                                            
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss51047034	NES13892237	PERLEGEN	MM_PANEL2	f	SNP	C	A	C	C	C
SNP Consensus Information
SNP					Consensus Type	A/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs36888102					SNP	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047034	NES13892237	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147159043 () rs orientation: forward

Symbol	Name	Function Class
Rr587151	regulatory region 587151	978 bp distal
Rr587152	regulatory region 587152	1923 bp proximal