rs36878828 SNP Detail

Summary

• ID
  rs36878828
• Variation Type
  SNP
• Alleles
  C/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:147159724 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATGTGAGTTT TGTGTGTAAG
  GTATGAGAAG GAAAGGGTAT TCCCTTCATA GTTACAACAT TCACCGAGCT CAAATAGTGG
  ACTGGGGGAA ATTAAAACCA AAAGCAAGTG ACCTAAATTT GTGACAGGAT GTGATGTAGG
  TTAAAAACAA TAAGACTTGA CTAGAAGGTA TATTCAATTA AGGGAAAGAA TGCTAAAAGA
  S
  ACTTGGTAGT AGGCAGACTC TCTAATTACT CAGTGTCACA CAACAAAGCA AATTCATCTC
  CATTCCTGCT GCTTGAGAAG AAGCAGTAGA GAAAAATCAG AAACAGCCCT CAGATCCCCC
  GACAGTGCTG ACATTTACCC ATTGAAGTTG GCTATGACTT GCAAACTGCA CAACAACCAG
  TGGCACCATT TCCTTTACAC                                            
  
  S = C/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51047024	NES13892157	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	C
SNP Consensus Information
SNP					Consensus Type	CAST/EiJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36878828					SNP	G	G	G	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51047024	NES13892157	PERLEGEN	MM_PANEL	f	SNP	C/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:147159724 () rs orientation: forward

Symbol	Name	Function Class
Rr587151	regulatory region 587151	1659 bp distal
Rr587152	regulatory region 587152	1242 bp proximal