rs36847620 SNP Detail

Summary

• ID
  rs36847620
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:145498322 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGAGTGATA GACACTTGAT
  GTCCTCCTCT GGCCTCTGCA TACACAGAAG TGGATAAGAA AGTGCACGCC TGCATACATA
  TGTGCGTACA ACGCACATAT ATACCATGCA CACACATACA CACGAATGAG TGTCTGGCAG
  TTTGTGTGGG CTTTTTTTTT GGCCAGTTTC ATTGTAAACT GGGAAAATAT AACTCCATTT
  R
  CCCACCAAAT AAATATAAAT GTCTGCGAGG TACTGTATGG AGACAGGGAC TGGGGCTTGG
  AGGGAAGAAA GCACATTCAT TTTCTCTCTC CTACTCTCCC TTCCTCTCCT CTATTCTCCT
  CCCTGCCCCC CCACCTCTCT CTCTCTTGTG TGAGTGTGTG CTGGAGACTG AGCCCAGGCG
  CTGTTGCCCA TGTTACCAGG                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51670052	NES14638155	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36847620					SNP	A	A	A	A	A	A	G	A	A	A	A	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51670052	NES14638155	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:145498322 () rs orientation: forward

Symbol	Name	Function Class
Ddah1	dimethylarginine dimethylaminohydrolase 1	Intron
Rr586839	regulatory region 586839	1364 bp distal
Rr586840	regulatory region 586840	1849 bp proximal