rs36832384 SNP Detail

Summary

• ID
  rs36832384
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:113306394 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GAGACTGCTG AGACAAGACC
  CCACTGAGTG CCTTTTCTCT TTCATCTGTT CCTCCAACAA CAACATTGCT CGCATTACTG
  GCATGGTGGA ACGGCTCTGC CAGGCCTTTG GACCTCGACT CATTCAGCTT GATGATGTCA
  CTTATCATGG CTTCCCAAAC CTCCATGCCC TGGCTGGTGA GTAGGTGCAT CCGTCCCCTT
  Y
  AGCATTTGGA CAGAAAGATC TATCTGTTCA GTTCTACCCA AGCTATGAGC TCCCATCTCA
  GAGCTTCCCA CTGTGCCAAA CACTGTCTCC ACCCAGAAGT CCTGGGTGAA GTAGTCTGGG
  CAGTCCCAGA TATAACTTGT CCTCAGATTT GATCTCTGAA ACAGCAGCAC CTCATTAGTT
  GGCTGTTTGC CAGTATATGC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
ss51842347	NES14762158	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	WSB/EiJ
rs36832384					SNP	C	C	C	C	C	C	C	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51842347	NES14762158	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:113306394 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Ogg1	8-oxoguanine DNA-glycosylase 1			Intron
				Noncoding-Transcript-Variant
Rr636491	regulatory region 636491			1225 bp proximal