rs3682257 SNP Detail

Summary

• ID
  rs3682257
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr3:87071445 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        AGGAA GCAAGCCAAG GCTCTAAGGG
  R
  CACACAGTGC CCAACTCTGG CAAAA                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BALB/cByJ	C57BL/6J	LG/J	SM/J
ss5058298	WI_WGS_3_87949757	WI	MOUSE	f	SNP	A	G
ss320831188	CHEV_3_86968060	CHEVERUD	SCREENING_POP	f	SNP			A	A
SNP Consensus Information
SNP					Consensus Type	BALB/cByJ	C57BL/6J	LG/J	SM/J
rs3682257					SNP	A	G	A	A

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:87071445 () rs orientation: forward

Symbol	Name	Function Class
Gm37855	predicted gene, 37855	1683 bp downstream
Kirrel1	kirre like nephrin family adhesion molecule 1	Intron
Rr2003	regulatory region 2003	734 bp proximal
Rr579450	regulatory region 579450	384 bp distal
Rr579451	regulatory region 579451	24 bp proximal
Rr579452	regulatory region 579452	987 bp proximal