rs36812874 SNP Detail

Summary

• ID
  rs36812874
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr12:82138856 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CCTTCCAGTG CTGTCAAGGT
  AGGGATCCTA TTTCCAGTAC ATAAATTCTC AGAGGCGCAG CCTAACTTCT GTAGGCCATA
  AAAATGTGTG CTTTGTGTCT TAGGGCATCA AGTTTTATGG TGGTGCCATA GACGTGCCAG
  CCTTAGGGAT CAGATCAATG GCTGGTGTCA CGCGTGGACA CTGCCTTCTC TGCTCACTAT
  R
  GTTATTTGTA CAGAGGTAAA ACGTTCTTTG TAACAAACCG TTCTGATACT AAGAGAATGG
  CTCAGAGACT GATGTGCTTT TCAAACAATC AGAGTCCCAT AATAAAAGAA TTATTCAGGA
  TTCGAAGAGG CCATTTAAAT GTCTGGCTGC CCGCTCTGTT TTACTTCATG CCTTTCTAGG
  TTTGGCGGTG CTTAAGCAAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51027081	NES14387674	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	G	A	A	A	A	A	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36812874					SNP	A	A	A	A	A	A	G	A	A	A	A	A	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51027081	NES14387674	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr12:82138856 () rs orientation: forward

Symbol	Name	Function Class
Gm30799	predicted gene, 30799	within coordinates
Gm59597	predicted gene, 59597	1556 bp downstream
Rr469220	regulatory region 469220	1276 bp proximal