rs36808111 SNP Detail

Summary

• ID
  rs36808111
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr14:70003155 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTATTATGAA TTGCTGTGGA
  AATATCTGGT ATTTCCTATG GTCTTAGGTA ACCCCTGAGA ACAGCTGACA CATGGTGTTG
  GTTACAAAAT CTCCCTACCT CCACCTTGGC AATAGATTTG ACTTCTAGGG GTAATCAAGG
  CAGAGTGCAA CGTCATTGTC TTGTTAATCT GGGCCTGTGT TTCTGGCCAG CTCTGGCCAG
  Y
  CCCAGTTACA AACACATCCT TATACACTGT CCATCTGCCT CCTCCTGGCT GTTTTGTACA
  GTGAATGTCT CATAGGACTC AGAAGGGAGT AATGACTTAT GGCTCTATCT CCTAACCCTG
  GGAGTATAGA CCAAGCACAC CCAGGAGAGG GGGTCGTGAT CTCACAGGTT GCACATGGGC
  CACTTACAGC CCCATCCAGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51529303	NES14632423	PERLEGEN	MM_PANEL2	f	SNP	C	C	T	C	C	C	C	C	C	C	C	C	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36808111					SNP	C	C	T	C	C	C	C	C	C	C	C	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51529303	NES14632423	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr14:70003155 () rs orientation: forward

Symbol	Name	Function Class
4930480K23Rik	RIKEN cDNA 4930480K23 gene	within coordinates
Rr494752	regulatory region 494752	1778 bp distal
Rr494753	regulatory region 494753	1658 bp proximal
Tnfrsf10b	tumor necrosis factor receptor superfamily, member 10b	1766 bp upstream
Tssr126375	transcription start site region 126375	1764 bp upstream
Tssr126376	transcription start site region 126376	1836 bp upstream