rs36805324 SNP Detail

Summary

• ID
  rs36805324
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:71346836 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CAAATAAAAT TATTAATAAA
  TAAAAAAAGA AAAGACATCT GGATACAGAT AGCTGGGGGG TGGGGTGGGA GATAATGTAT
  GGGTGTATGG GTGGGTGAAT GGTGAGGGAG AGAGGAGAAT AACAATAGAA GTAACTTCAA
  TGCTTTAAAT CCAGTGGGCA GATGAACATA AAAGCATGGG CAGTTGCCTA TCACTTGTAT
  W
  CTTGCTTTGG TATTTGAACC CACATGGGCC AAGACTAACC TTTATTTCCA AACATATGTT
  ATGCCTAAGT CATATCCTTA TTGTTAGAGT GTTGGTAAAA ATAATGTGTA TTTTCATTGG
  CCCAGGAGAA GAACTTAAAA GGAACAATCG AAGACCTGTG ATGGATAATG CACCAAAGGA
  TTACCTTTCG CATTTCCTGT                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss50469282	NES13701885	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36805324					SNP	A	A	A	A	A	A	A	A	A	A	T	A	A	T	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50469282	NES13701885	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:71346836 () rs orientation: forward

Symbol	Name	Function Class
Rr540369	regulatory region 540369	1684 bp distal
Rr540370	regulatory region 540370	1780 bp distal
Rr540371	regulatory region 540371	1282 bp proximal