rs36799758 SNP Detail

Summary

• ID
  rs36799758
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:91163893 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCATCTACCT CTAGCTCCCC
  CTACTGGCAG GCAGGAGGTC TGCTCAGATG AGACCAGTCC CTGGGTAGGG AGGGCTTGGG
  GATGTTGAGT CTGGGTCCTG GTTTTGCAGC CTGCCTTAAG GCTCTTCTTG ACCACAAGAC
  TGTGAGCAAG ATGATTCTCC TCTTCTTTTC CATTTTCTTT CTCAAGTGGA AACTAACAAT
  Y
  CCAACAGAAT GCCAGAGATG AATAATCTCA GATGCAGGAC TGAAGGCCCA AATGTAGCCA
  GGGTTCTCAC AGAGGACATG GGAAGAGGCC CCTGGGAAGT CGGACTATAC AATGGCTCCA
  TGTCCTTAGA AGCCTCCTCC AGGCTGCTCC TGGATACCCC TGGAAAACAG TACTAGCTCA
  GGGATTGACC GTGCATACGG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51363887	NES13733443	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C	T	C	T	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36799758					SNP	C	C	C	C	C	C	T	C	C	C	T	C	T	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51363887	NES13733443	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:91163893 () rs orientation: forward

Symbol	Name	Function Class
Rr634418	regulatory region 634418	169 bp distal
Rr634419	regulatory region 634419	84 bp proximal