rs36798492 SNP Detail

Summary

• ID
  rs36798492
• Variation Type
  SNP
• Alleles
  A/C

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:130847931 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        GTCTC CAAACATGCC CGTGTTCAGC
  M
  CACAGCTAAT CACTCTAACA ACATG                                      
  
  M = A/C
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
ss51635597	NES14652654	PERLEGEN	MM_PANEL2	f	SNP	C		A	A	A	C	C	C	C		C	C
ss135903412	ENSMUSSNP1003682	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	A
ss320967463	CHEV_3_130757200	CHEVERUD	SCREENING_POP	f	SNP										A			C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	NZW/LacJ	PWD/PhJ	SM/J
rs36798492					SNP	C	C	A	A	A	C	C	C	C	A	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51635597	NES14652654	PERLEGEN	MM_PANEL	f	SNP	A/C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:130847931 () rs orientation: forward

Symbol	Name	Function Class
Gm65588	predicted gene, 65588	within coordinates
Rr585257	regulatory region 585257	within coordinates