rs36795085 SNP Detail

Summary

• ID
  rs36795085
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:128338585 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GGAAAATTCT TACTGGATCC
  TAAACAAATC ATTTTTTTTC TAAGATTCAT TCCATATCAT ACCATATATA GCAACAACAA
  CAATAATTCT ACATGAATCC AGCTCTCCCT TCATTTGTTT ATAAATACAT TACTAACTCT
  CCACTCTTCT ACACTCAAGT TGAATTCATG CTTTGGTAAC ACTGCAATTC TAATATTGAT
  Y
  CTCAAGCTTA AAGCCCTAAA TATAATGATA TCCTGTATAT TAAGATTCAC CTAATCACCT
  GAATACATTC CTGAATGTTC TTTTAGGATA TAGACACTGC AATCATTTCC TTCTGCCATT
  TTGTGTGCCC TGCTTCCCAC CACTCTGAAT TTGTTTTTAT CGATCCGTAA GCACACCAAG
  CTCCAAGATC CCTTAGGTGT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	WSB/EiJ
ss51621371	NES14658782	PERLEGEN	MM_PANEL2	f	SNP	C		C	C	C	C	C	T	C	C	C	C		C	T
ss135883772	ENSMUSSNP3590982	ENSEMBL	ENSEMBL_Sanger	f	SNP		C	C						C				T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	MSM/Ms	NOD/ShiLtJ	WSB/EiJ
rs36795085					SNP	C	C	C	C	C	C	C	T	C	C	C	C	T	C	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51621371	NES14658782	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:128338585 () rs orientation: forward

Symbol	Name	Function Class
Rr497	regulatory region 497	within coordinates
Rr584942	regulatory region 584942	1278 bp proximal