rs3679348 SNP Detail

Summary

• ID
  rs3679348
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:119829470 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        TGTAGTTAAG GTTACAGGTG GGACATAGCC CAGTCCTTGA
  GAAACAAGTT TAATCATAAA CAAGAGAGAA CCGAGTTTGT CTTTTACTAT AAGATGGCTT
  Y
  TAAACCTAAA TTGGAAAAAG GCTGGTTCTT AAGCAGGAAG CCCTAGGTTC AATACCCAGT
  ACTGAAAGCA AAAATAAGAA CAACAAACTT TCTAAATAG                       
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
ss5055367	WI_WGS_6_120652165	WI	MOUSE	f	SNP	C		T
ss45978372	mCV24679777	ABI	CRAMUS_MOUSE	f	SNP	C	C	T	C
ss133593596	ENSMUSSNP3991458	ENSEMBL	ENSEMBL_Sanger	f	SNP		C		C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	C57BL/6J	DBA/2J
rs3679348					SNP	C	C	T	C

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:119829470 () rs orientation: forward

Symbol	Name	Function Class
Rr380000	regulatory region 380000	1443 bp upstream
Rr637739	regulatory region 637739	1766 bp proximal