rs36786984 SNP Detail

Summary

• ID
  rs36786984
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr18:71345450 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              GCCTAACAGC AATGTAAAAT
  TCTGAGGTGC TATGTATGAT GGGAGGCACT GTGTCCAAGG ATGTGAATTA GAGCTTTCTA
  CCTCTAGAGA ACACAGGGTA AATCAGTACT CTTACTTAAG CTAGGAAAAA ATTGGAAAAT
  AGGAATAATT GAGAATATAT ATGTGTATAT ATATAATCTG AGTTAGGACT CAGAAATATG
  Y
  TGTAAGACAG ATATTTTTGA TTATTCATCA GGGTTTCTAA AATTTTTCAA ATTATGATTA
  AATAGGAGTT TTAGCTAACC TGGCTTTGTA TCTTAGAAAA GTGTAAATTA AACGATCATT
  TGTTTCACCT TTTAGCTACA GTATAATATC ATAAAAATAG CCTAGGTGGT TTGACTTTAG
  TAGATTAGAT ATTGTCGTTA                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
ss50469292	NES13701973	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	C	C	C	C	T	C	T	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	PWD/PhJ	WSB/EiJ
rs36786984					SNP	C	C	C	C	C	C	C	C	C	C	T	C	T	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss50469292	NES13701973	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr18:71345450 () rs orientation: forward

Symbol	Name	Function Class
Rr540369	regulatory region 540369	298 bp distal
Rr540370	regulatory region 540370	394 bp distal