rs36786443 SNP Detail

Summary

• ID
  rs36786443
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:143854814 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CGTTGTTTTG GATGAGGGTC
  CTCTCTCTCA CTTGCCTGCT TCTCCCACAG ACCCATGCCA AGACTCAGCC CCGGCCATCT
  ACCTACATAT TTATGTTGTC AAAACTGATA GGATGCGTGA TCTTTTCCAT AATTATCATT
  AAGCCTTCTG TGGGGTTGTC TAAAGGCTGA CTCTAACAAT ACCCTACAAA TCTAAAGGTG
  R
  AGTCTTTATA ACCACATCTA TATTTTCATT TCTGGCCTAG TCTCTTCCCT CCTCAAGGGT
  TCCACCTAGC CATCTCTTAT TTCTGCTCCT GTTTAGGTTG CCTGCTGCCC GGCTGCTGTC
  CACTGTCATG CAGGTCCTTC TCTTCTGCCC TTCTAGGTTA GAGCCACCGT CCCCACATCC
  CATGGGACAC TAGTTACATT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NZW/LacJ	PWD/PhJ
ss51656054	NES14644049	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	G	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	KK/HlJ	NZW/LacJ	PWD/PhJ
rs36786443					SNP	A	A	A	A	A	G	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51656054	NES14644049	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:143854814 () rs orientation: forward

Symbol	Name	Function Class
Rr586587	regulatory region 586587	1618 bp distal