rs36785936 SNP Detail

Summary

• ID
  rs36785936
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:49820032 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGTTATTCCA CCTGGTGTTC
  TATTGAAGAA ATGACTAGAA TTCTCAGGAC ACATCTGGTA AAACTGATTT ACTCTGTCTC
  TTTTATCGGA GGGATATTAC CAATACAAAA GGAGATTGTA TAATATAGAA AACAGGTGGA
  TGAATAGCCA CCCATTTAAT TTTATTTATT TAATGCAATC TCTTTGGAAG GTGTCAAAAT
  R
  TGCTTTCTTG ATAGGCTTGT GCCATTTTAA TAAATAAATT AATAAATTAA TAGGATTTCT
  CTCTAGCACA TACAAAGTCC TAGGTTCGGT CCTCTAGCAT TGAAAATAAA ACAAGCAATC
  CCAAAACCTT TCCCAACTTA TCTATACATT AAAAGTGAAC ATTTAGGTGA TCTACCAAAA
  CGAAATACAT ATAATGCTAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51521227	NES14698717	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36785936					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51521227	NES14698717	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:49820032 () rs orientation: forward

Symbol	Name	Function Class
Rr576117	regulatory region 576117	298 bp proximal
Rr576118	regulatory region 576118	1674 bp proximal