TGGGGCTGTA AAGAGCTTAC ACTCTGCTAA CCTAGTAGGA CACCTGCTGG TGTTCCTAGG TCTGAGCCCA AAGGCTGTGC TTCAGAAAGC CTGCCTGAGG TCCCCACCCT ACAACCGTTC AACAGATCCT GGCTGAACTC AGAGGACTCC CTGGTGGCCT CAGGGCAGCT CCTGGATGTC CTCTTGGGAG AGGCTCCAGC Y TGCTGTCCAG GATTGTGAAT GCCTCAGAGG CTATAGGCTG GTGACTCTCT GTGAGTCACT TTGCTGGCTG TGAGCAGAGG TCACAAGACA TGCACAGTGA TACTTCTTGT GAGACACCAC ACAGGGCCTC ACTGAGTCTC TTGTCCATCT GAGGTCCCCC CCTGACCATT CCCCCTTCTC AACTGAGGTC TTCTACTCCA Y = C/T Note: Sequence in lower case indicates low-complexity or repetitive sequence |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
WSB/EiJ |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
ss51760897 | NES14794791 | PERLEGEN | MM_PANEL2 | f | SNP | C | C | C | C | C | C | T | C | C | C | T | C | C |
SNP Consensus Information | ||||||||||||||||||
SNP | Consensus Type | 129S1/SvImJ |
A/J |
AKR/J |
BALB/cByJ |
BTBR T<+> Itpr3 |
C3H/HeJ |
CAST/EiJ |
DBA/2J |
FVB/NJ |
KK/HlJ |
MOLF/EiJ |
NOD/ShiLtJ |
WSB/EiJ |
||||
rs36783009 | SNP | C | C | C | C | C | C | T | C | C | C | T | C | C |
Assay ID | Submitter SNP ID |
Submitter Handle |
Population | ss orientation |
Variation Type |
Alleles |
---|---|---|---|---|---|---|
ss51760897 | NES14794791 | PERLEGEN | MM_PANEL | f | SNP | C/T |
Location: Chr6:89010786 () rs orientation: forward | ||||||||
Symbol | Name | Transcript | Protein | Function Class |
Allele | Residue | Codon Position |
AA Position |
---|---|---|---|---|---|---|---|---|
Gm66902 | predicted gene, 66902 | within coordinates | ||||||
Rr1306 | regulatory region 1306 | 872 bp proximal | ||||||
Rr634069 | regulatory region 634069 | 286 bp proximal | ||||||
Rr634070 | regulatory region 634070 | 1240 bp proximal |
Mouse Genome Database (MGD), Gene Expression Database (GXD), Mouse Models of Human Cancer database (MMHCdb) (formerly Mouse Tumor Biology (MTB)), Gene Ontology (GO) |
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last database update 03/18/2025 MGI 6.24 |
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