rs36772807 SNP Detail

Summary

• ID
  rs36772807
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:108072354 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AAGAGAGAGG GTTCAATATA
  ATTCAAATCC ACTTTTCACA CATACTACAA CCTAATCTCC CAAGAGGCAA GAGGTTTCAC
  AGCTAAGAAG GTAAGAACAG AAACTTCGGG CTTATAATCC CAGGACTGAT TTTGATCCAA
  CAAACTAAGT CCTCTGAGAG AACACTCAGG AGAATGGATT TTGAACAGTC TCTTTAAAAA
  R
  CGCTTCTAGT ACAACAAGTT GGGCCTGGTC CGGTGACCAA TCCTGCAGAT CCTAAGATGG
  AATCAAGGGA TGAGGTGTGG GGCTATGATG AGACTAAGTA GCATGCGAGG CCTCTCTGAC
  TCTCAGACCA TGCTTGTTAA CTCTCAGAGG CACATGAGGT CAGAGCGTGC CTGAATGAGC
  CAGATGTAGA AAAAGTCAGT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
ss51821660	NES14764186	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	A	G	G
SNP Consensus Information
SNP					Consensus Type	BTBR T<+> Itpr3/J	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	WSB/EiJ
rs36772807					SNP	G	G	G	G	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51821660	NES14764186	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:108072354 () rs orientation: forward

Symbol	Name	Function Class
Rr636032	regulatory region 636032	1585 bp distal
Rr636033	regulatory region 636033	95 bp proximal