rs36768898 SNP Detail

Summary

• ID
  rs36768898
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:16998949 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGTTTTGGT GTGTCTCTGA
  GATTAAAGGA AGCTACATTA AGGATGCTAA ATAATCAAGA AAATCATGAG AATCAGACGC
  AGCCAATGGG TGGCTGTGAA ATTTTTAGTT CCTTGTTTCC AATCCCCGAG TACCAGCTGT
  GTTCTAACCC CTGAGTACTT CATGACATAT TTTCTACTTT TCCTTAAGCC AGCTCCAGAA
  Y
  AGTTCTGTAA TTTGTAAAAA TAAGTACTTT ACTCTCAAAA AAACAACTTG ACCTCAGACA
  CCAAATGCAT CCTATTCTCC TAACTGCTGC TCAGTTCTTA GTTCTCCCCA ACTTCTTTGG
  CTTTGCTTTG TTTTGTTTTG TTTTTTGTTG TTGGTGGTCT TTTTTTGTTT TTTGTAGACT
  CCTCTGAGTT CTAAAAGCTG                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
ss51242927	NES13805297	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	C		T	C	C
ss321753149	CHEV_6_16948950	CHEVERUD	SCREENING_POP	f	SNP											T				C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	LG/J	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	SM/J
rs36768898					SNP	C	C	C	C	C	C	T	C	C	C	T	T	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51242927	NES13805297	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:16998949 () rs orientation: forward

Symbol	Name	Function Class
Gm67154	predicted gene, 67154	within coordinates
Rr626743	regulatory region 626743	546 bp proximal
Rr626744	regulatory region 626744	580 bp proximal