rs36764240 SNP Detail

Summary

• ID
  rs36764240
• Variation Type
  SNP
• Alleles
  G/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr1:162164365 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGTAACTTCC ATGGCTGTAA
  AGGTAACCTC CAAGAAAATA TTCATGCTAC TACTTTGCAA TTAAATCAAC AGAAATAGAA
  GGAATATATT TTATGCTTTC TCTCTTTTTT TCTTTTAGTC ATTCCTATGA ATAGTGTTTC
  TTTTCCTACA TTAAGTTTCT AGATTCTAAT TCCACAAAGC AGCTCAAGGA AGGTTTAAAC
  K
  TCTTCAAGCC ATGTCTTTAT AGTGACCCCC AGTGGCAAAG GAATGAATGA CTATATTGGT
  GTAAGTAACC CACACCTGCC TGTCTACAAG GACAGTAACA AGTTCCATCT TAACAGCACA
  TTTGCATTGT CAAATTTTGC TTCTTTGTTC TTGTTTTTAA AATAATCCAA ATCTCTCACA
  CATACACACA TACACGAACA                                            
  
  K = G/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
ss51399122	NES14460622	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	G	T	T	T
SNP Consensus Information
SNP					Consensus Type	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	DBA/2J	MOLF/EiJ	PWD/PhJ
rs36764240					SNP	T	T	T	G	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51399122	NES14460622	PERLEGEN	MM_PANEL	f	SNP	G/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr1:162164365 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Dnm3	dynamin 3			Intron
				Noncoding-Transcript-Variant
Rr421955	regulatory region 421955			1801 bp distal
Rr421956	regulatory region 421956			400 bp distal
Rr421957	regulatory region 421957			within coordinates
Rr421958	regulatory region 421958			19 bp proximal