rs36762223 SNP Detail

Summary

• ID
  rs36762223
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:146956715 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TCACTGTCCA CGTGGTAGAA
  AGAGAGAAAC TATTCCTACA GGATCATATT CCTATACTAT CCAGTCTTCT ATATACACAT
  GATATGGCAC AGGCGTGTGT ATGTGCGTGC ATGTACACTC ACACACACAC ACACAAACAC
  ACACATAGAC ACATACAGAA AATCAATAAA TGTTTAAGAA ATTTGCCGGT CAAAATAAGG
  R
  ACAATCAATC AAATGAATCT CCTTCCAAGC AAAGTCACAC ATTTGCATTG CCTTGCAGTT
  CTGCCCAGCA ACAAGAGGCC CACAAAGAAC ATCCTGACTT CTCTTGCAGG CAAGGTAAGT
  GCAGGGCTGA AAAACTATGG AGTAGGTGCT TGCAACTACA ACTAAGTGTA CAGCATGGGG
  ACAGTGGTGA TTTTTTTTTC                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51049444	NES13898663	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36762223					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51049444	NES13898663	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:146956715 () rs orientation: forward

Symbol	Name	Function Class
Rr587140	regulatory region 587140	751 bp distal
Rr587141	regulatory region 587141	1259 bp proximal