rs36757500 SNP Detail

Summary

• ID
  rs36757500
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:84563161 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        ACACCGGATT CGGAGGGTTC GCTTTTAACC CCTTCAGCAC
  CCGCTGTCTG TCCTCCCGAG GGATTTGACC CCCAGGGACG CGGATGCCCA GGCGAAAAGC
  R
  CCTCTCCAAC TTTTGTGCTG GCTGCACCAC ACCCGCAAGG GGCCTTGTGT GAGATTGAGA
  AAAATGGCAA GGGACACGGG GGAGGGGCAG GTCAGGAAAC                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	C3H/HeJ
ss51731908	NES14800282	PERLEGEN	MM_PANEL2	f	SNP	A	G	G
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	C3H/HeJ
rs36757500					SNP	A	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51731908	NES14800282	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:84563161 () rs orientation: forward

Symbol	Name	Transcript	Protein	Function Class	Allele	Residue	Codon Position	AA Position
Cyp26b1	cytochrome P450, family 26, subfamily b, polypeptide 1			Intron
				mRNA-UTR
Rr633074	regulatory region 633074			1491 bp proximal
Tssr61720	transcription start site region 61720			856 bp downstream
Tssr61721	transcription start site region 61721			1465 bp downstream
Tssr61722	transcription start site region 61722			1758 bp downstream
Tssr61723	transcription start site region 61723			1812 bp downstream