rs36757460 SNP Detail

Summary

• ID
  rs36757460
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151876951 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              AGGCTTGCTG GCAAGTGTTT
  TTACCATTGA GCCATCTTAC CAAAGGGCAA GCTACCTGAA TACAATGTGC CCTACCATAA
  CAGACACAGG AAAAGGCAGG CATGTTCAAG GAGCATATAT TCTAGCCACT CAGGATCAGA
  CACAAAACTG AAATAGAAAC ACCAACAGGT TGGTCCACAA GCCCTTGCTG CCTCAGAGTC
  W
  GGCAGTTTCC TTTATACAAG CTCCAAATAG GAGAGCAAGT TTTAAAAATG CATTTTCATT
  GAAGGGCTAA GGAGATGAGT CAGAGGGCAA GAGGTCATTG TGCACACAGA TAAGCACTGG
  AGAAGCCAGG AAAAGTTAAA CAACGAAGGC TTATCTCTTT GCAGGAAGGA GATGTTTACC
  TGTCATCCCC CCCTACCCCC                                            
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51060694	NES13428280	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	A	T	T	T	T	T	A	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36757460					SNP	T	T	T	T	T	A	T	T	T	T	T	A	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51060694	NES13428280	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151876951 () rs orientation: forward

Symbol	Name	Function Class
Gm64603	predicted gene, 64603	within coordinates
Gm64610	predicted gene, 64610	within coordinates
Rr587476	regulatory region 587476	within coordinates
Rr587477	regulatory region 587477	653 bp proximal