rs36755046 SNP Detail

Summary

• ID
  rs36755046
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83357550 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              ATCTATATCT GCTTATAGGC
  AGGAGCTTGT CAAACCAGGA TTTAAATCCA AAATTCCTGT GGATCCCACT TTAGACAGAA
  TATGAGCATC CTGTAAAAAT TTTAGAGCAA TATATATTTA TACCATCTTT AAAGCAATTA
  ATTCAAACTT TCACTATTAT CTGCCTATAG GGAACACATA GATTTTACTT GTTAAGCTCT
  Y
  TGCCTAGAGC AGCCATCCTG TTATACTTGT GGTACTTTCT ACCTGGAACC ACAGACATTT
  ATTTTATTAA CACCTGTTAT AATATCTATC TGTTACGCTC TCTACCTGGA GCAACAGACT
  TCTATTAATT AATACCTGTC CATAGCAGAT GATTATCAGT GCTCTCTCTA CTTGGAGTCA
  GTGACTAATT CTCCCCATCC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
ss51561923	NES14683389	PERLEGEN	MM_PANEL2	f	SNP	T	C	C	C	C	C	C	C
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ	WSB/EiJ
rs36755046					SNP	T	C	C	C	C	C	C	C

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51561923	NES14683389	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83357550 () rs orientation: forward

Symbol	Name	Function Class
Rr578862	regulatory region 578862	487 bp proximal