rs36723173 SNP Detail

Summary

• ID
  rs36723173
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr6:72857626 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TATCCTGCTG TTATACTCCT
  TGACCACTAG AATGCAAACC CCTCACAAGC AGAAGCAGTA TCTTATGAAA GGAACTGTAT
  CCAGGTGTGA TGGGACACAC AGAAGCTCAC CACTCACACA TATGGTCCAA GGCCAGACCG
  CTCTAAATCA GCCAGACTGT CTGAAAGGGC CAGCAAGATG GGTGAGCCTG CTGACTTAAG
  Y
  TTCCAGCGAA TGGAGAGAAG CCATCCCCAA AAGTTGTCCT CTGGCACAGG AAGATACTAC
  TAATAAATAA AATAGTATAT ATTATATATA TTATAATATA TAATAAATTA GTAAGTGAAT
  ACACATTTTA AAATGTGCTG TACATGGAAA CATCTTGTCA ATTTTTTTTT TAAGATTTAT
  TTATTATTAT ATGTAAGTAC                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51692052	NES14821854	PERLEGEN	MM_PANEL2	f	SNP	C	C	C	C	C	C	T	C	C	T	T	T	C	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36723173					SNP	C	C	C	C	C	C	T	C	C	T	T	T	C	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51692052	NES14821854	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:72857626 () rs orientation: forward

Symbol	Name	Function Class
Kcmf1	potassium channel modulatory factor 1	Intron
Rr632324	regulatory region 632324	528 bp proximal