rs3671504 SNP Detail

Summary

• ID
  rs3671504
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  107
• Last Updated in dbSNP Build
  138
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser | Alliance Variant
  

Genome Location and Flanking Sequence

• Location
  Chr4:154941967 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                        CTCCC CTCCCCTCCC AGACACACGT
  R
  ACACACTGCT GCCTGGTGTG TGCAC                                      
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
ss5047474	WI_WGS_4_150305278	WI	MOUSE	f	SNP	G			A
ss148107708	ENSMUSSNP1234654	ENSEMBL	ENSEMBL_Sanger	f	SNP		G	G		G
ss321440215	CHEV_4_154231619	CHEVERUD	SCREENING_POP	f	SNP						G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	129X1/SvJ	A/J	C57BL/6J	DBA/2J	LG/J	SM/J
rs3671504					SNP	G	G	G	A	G	G	G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr4:154941967 () rs orientation: forward

Symbol	Name	Function Class
Rr606279	regulatory region 606279	1300 bp distal
Rr606280	regulatory region 606280	1109 bp distal
Rr606281	regulatory region 606281	429 bp distal
Ttc34	tetratricopeptide repeat domain 34	Intron