rs36700321 SNP Detail

Summary

• ID
  rs36700321
• Variation Type
  SNP
• Alleles
  A/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  126
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr6:8831936 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                        CTGGCTTGGA GTTCACCGTA GCCTGAAGTT CTAGCATCCT
  TTTGTAAAAA GAAGCAAGGT GAACTTTGGT TTTTGTTTCT TTCATCTAGC TTAATTTTTT
  W
  GTTCCTTCTG CCATAGCAGG TGCATACCCC TGATCTGACT CTCAGCTCTC CTTCCCTTAG
  ACCATGTCTG TAGTTTTTGT ACATGAGTGT GTGTGAACAA                      
  
  W = A/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
ss51546720	NES14862665	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	T	A	A	A	A
SNP Consensus Information
SNP					Consensus Type	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	CAST/EiJ	KK/HlJ	MOLF/EiJ	PWD/PhJ
rs36700321					SNP	A	A	A	T	A	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51546720	NES14862665	PERLEGEN	MM_PANEL	f	SNP	A/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr6:8831936 () rs orientation: forward

Symbol	Name	Function Class
Rr626446	regulatory region 626446	383 bp distal
Rr626447	regulatory region 626447	510 bp distal