rs36700223 SNP Detail

Summary

• ID
  rs36700223
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:83425514 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGCATAAGAA TAGTTCTAAA
  ACGTCCAACG CTGGCACAGC TGGAGAAAGT TCAGGATGCC TTCATACCAA GGCCAGAAAT
  CACTGACTGA TGCAATGTAT CAGGAATGAG GATAGGTCTG TGTGCAGATA AAAAGAGCCA
  ACTTGTTGGA GGGCTGTGAA TCTAATTAAT CACTGCCAGG GCACATTGGA AAAGGCCAAA
  R
  AACACAGTCT CCTAATTGCC CTCATTTGTC TGGTTATTAA TCTGCGCTGC AGCAAAAGAA
  ACTTGGGGGT CATGATTTTG CCATCCAGAG CCCTGGAGGA CAATCCGTCT TTGGGGAAAG
  GGCTGATGAA GTTTTGAGCC TTTCGGAGTT AGTTCCCTGT AACCCACTCA GAGCACCATT
  GATTGAATGT TTTGGGTCAT                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
ss51561386	NES14681227	PERLEGEN	MM_PANEL2	f	SNP	A	A	A	A	A	A	A	A	A	G	A	A	A
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	WSB/EiJ
rs36700223					SNP	A	A	A	A	A	A	A	A	A	G	A	A	A

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51561386	NES14681227	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:83425514 () rs orientation: forward

Symbol	Name	Function Class
Rr578867	regulatory region 578867	101 bp proximal