rs36687387 SNP Detail

Summary

• ID
  rs36687387
• Variation Type
  SNP
• Alleles
  C/T

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:151772096 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              TGGGGTGTCA CAGTCATGTG
  TTCTAGCACA GAAATCTGGT CCAGAGTAGA TGAAACACCT ACCATATGCA GGTATGAGGG
  TCCCGGGGTT TCTGAATCCA CTCGACCTTA CCAAGTTGTC TGGCATGGTC CGCTGCACCA
  CAGAGGACTT AGGTCAGACC CATACAGGCA GGAGCCCTGA TCTCTGTGAG CCCGCTTGAG
  Y
  CCTGGAAGAT TGGTGTCCCA CATGACTTCT AAAGTGGTGC TTCATGTACG CTGAAATATA
  AACAAAGTCC TCCATCTACA TTGACCAATG TAGCGCCTAC GGGTGTGTTC AGTTCACCGC
  TCATGCGCAA AATCCTCTTC TTCACAGGGA ATGGTGCTAA TACTTTAGAT TGTGAAAACC
  AGGTTAGCTA CCTTTCTTAT                                            
  
  Y = C/T
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51060934	NES13431229	PERLEGEN	MM_PANEL2	f	SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36687387					SNP	T	T	T	T	T	T	C	T	T	T	T	T	T	T	T

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51060934	NES13431229	PERLEGEN	MM_PANEL	f	SNP	C/T

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:151772096 () rs orientation: forward

Symbol	Name	Function Class
Gm64437	predicted gene, 64437	within coordinates
Rr587440	regulatory region 587440	279 bp proximal
Rr587441	regulatory region 587441	386 bp proximal