rs36684328 SNP Detail

Summary

• ID
  rs36684328
• Variation Type
  SNP
• Alleles
  A/G

• Created in dbSNP Build
  126
• Last Updated in dbSNP Build
  137
• Additional Resources
  JBrowse Genome Browser | Ensembl SNPView | UCSC Browser
  

Genome Location and Flanking Sequence

• Location
  Chr3:117231972 (GRCm39)
• SNP Orientation to the Genome
  forward

• SNP Reference Flanking Sequence

                                              CTACAACCTT CCTCAAATGG
  CAAGTGAACA ATCTCAGTAC TGTTTTTCCA AAGAGGAAAA GGATCTCTCA GGCTGCAGAC
  TAGGGTATCA CAGGACCCCT AGGAAGTCAC TACATGTTCT GGACCATCTG CTCAAAATCT
  AATTGCTAAT GGATGAACAG CTTTTGTTTT CTTTTGACCC ACAAATACAG CAAGTCTTAA
  R
  AGGGGACCAA GCTAGGATTT TTGAGACTGT CCGGGACAAA GCAAAAGAGA ATAGCAATAA
  CTCCAGTACA TAGGGGCACA TATATCTTTT CATTTACATG GAAATTATGT GAAACCTTTT
  CAAATCCGTG CTTCTCCATC CATCAATAAC TTAGCTTCAG TAATCAGAAT CAAATTTTAA
  TTTCTTTTAA AAAATGAATA                                            
  
  R = A/G
  

  
  Note: Sequence in lower case indicates low-complexity or repetitive sequence

  ---

SNP Assays
and
SNP Consensus

Strain alleles of submitted assays, and consensus values for this SNP

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
ss51011772	NES13912401	PERLEGEN	MM_PANEL2	f	SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G
SNP Consensus Information
SNP					Consensus Type	129S1/SvImJ	A/J	AKR/J	BALB/cByJ	BTBR T<+> Itpr3/J	C3H/HeJ	CAST/EiJ	DBA/2J	FVB/NJ	KK/HlJ	MOLF/EiJ	NOD/ShiLtJ	NZW/LacJ	PWD/PhJ	WSB/EiJ
rs36684328					SNP	G	G	G	G	G	G	A	G	G	G	G	G	G	G	G

Additional submitted assays for this SNP, where the strain of origin for observed alleles is not specified by the submitter

Assay ID	Submitter SNP ID	Submitter Handle	Population	ss orientation	Variation Type	Alleles
ss51011772	NES13912401	PERLEGEN	MM_PANEL	f	SNP	A/G

Gene/Marker
Associations
and
Function
Classes

MGI genes/markers associated with the SNP

Location: Chr3:117231972 () rs orientation: forward

Symbol	Name	Function Class
Rr583844	regulatory region 583844	236 bp proximal
Rr583845	regulatory region 583845	613 bp proximal
Rr583846	regulatory region 583846	1934 bp proximal